New porcine epidemic diarrhoea virus variant with a large deletion in the spike gene identified in domestic pigs
Identifieur interne : 001059 ( Main/Exploration ); précédent : 001058; suivant : 001060New porcine epidemic diarrhoea virus variant with a large deletion in the spike gene identified in domestic pigs
Auteurs : Tsuneyuki Masuda ; Satoshi Murakami [Japon] ; Osamu Takahashi [Japon] ; Ayako Miyazaki ; Seiichi Ohashi ; Hiroshi Yamasato ; Tohru SuzukiSource :
- Archives of Virology [ 0304-8608 ] ; 2015.
Abstract
From October 2013 to date, approximately 1,000 outbreaks of porcine epidemic diarrhoea virus (PEDV) have occurred in Japan. Porcine epidemic diarrhoea with non-lethal effects in piglets was identified in Tottori prefecture in October 2014. Complete genome analysis revealed that the causative pathogen, Tottori2, is a new PEDV variant with a large (582 nt) deletion in the spike gene. Phylogenetic analysis indicated that the Tottori2 PEDV strain might have been derived from the current PEDV strains circulating in domestic pigs. Moreover, the Tottori2 PEDV strain was successfully isolated in Vero cells by serial passage.
The online version of this article (doi:10.1007/s00705-015-2522-z) contains supplementary material, which is available to authorized users.
Url:
DOI: 10.1007/s00705-015-2522-z
PubMed: 26162305
PubMed Central: 7087250
Affiliations:
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Disease and Epidemiology Research Division,</institution><institution>National Institute of Animal Health, National Agriculture and Food Research Organization,</institution></institution-wrap>3-1-5 Kannondai, Tsukuba, Ibaraki 305-0856 Japan</nlm:aff><wicri:noCountry code="subfield">Ibaraki 305-0856 Japan</wicri:noCountry></affiliation></author></analytic><series><title level="j">Archives of Virology</title><idno type="ISSN">0304-8608</idno><idno type="eISSN">1432-8798</idno><imprint><date when="2015">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p id="Par1">From October 2013 to date, approximately 1,000 outbreaks of porcine epidemic diarrhoea virus (PEDV) have occurred in Japan. Porcine epidemic diarrhoea with non-lethal effects in piglets was identified in Tottori prefecture in October 2014. Complete genome analysis revealed that the causative pathogen, Tottori2, is a new PEDV variant with a large (582 nt) deletion in the spike gene. Phylogenetic analysis indicated that the Tottori2 PEDV strain might have been derived from the current PEDV strains circulating in domestic pigs. Moreover, the Tottori2 PEDV strain was successfully isolated in Vero cells by serial passage.</p><sec><title>Electronic supplementary material</title><p>The online version of this article (doi:10.1007/s00705-015-2522-z) contains supplementary material, which is available to authorized users.</p></sec></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Wood, En" uniqKey="Wood E">EN Wood</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Pensaert, Mb" uniqKey="Pensaert M">MB Pensaert</name></author><author><name sortKey="De Bouck, P" uniqKey="De Bouck P">P de Bouck</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Van Reeth, K" uniqKey="Van Reeth K">K Van Reeth</name></author><author><name sortKey="Pensaert, M" uniqKey="Pensaert M">M Pensaert</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Song, D" uniqKey="Song D">D 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sortKey="Filipski, A" uniqKey="Filipski A">A Filipski</name></author><author><name sortKey="Kumar, S" uniqKey="Kumar S">S Kumar</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Callebaut, P" uniqKey="Callebaut P">P Callebaut</name></author><author><name sortKey="Correa, I" uniqKey="Correa I">I Correa</name></author><author><name sortKey="Pensaert, M" uniqKey="Pensaert M">M Pensaert</name></author><author><name sortKey="Jimenez, G" uniqKey="Jimenez G">G Jimenez</name></author><author><name sortKey="Enjuanes, L" uniqKey="Enjuanes L">L Enjuanes</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Gallagher, Tm" uniqKey="Gallagher T">TM Gallagher</name></author><author><name sortKey="Buchmeier, Mj" uniqKey="Buchmeier M">MJ Buchmeier</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Japon</li></country><region><li>Région de Kantō</li></region><settlement><li>Tokyo</li></settlement></list><tree><noCountry><name sortKey="Masuda, Tsuneyuki" sort="Masuda, Tsuneyuki" uniqKey="Masuda T" first="Tsuneyuki" last="Masuda">Tsuneyuki Masuda</name><name sortKey="Miyazaki, Ayako" sort="Miyazaki, Ayako" uniqKey="Miyazaki A" first="Ayako" last="Miyazaki">Ayako Miyazaki</name><name sortKey="Ohashi, Seiichi" sort="Ohashi, Seiichi" uniqKey="Ohashi S" first="Seiichi" last="Ohashi">Seiichi Ohashi</name><name sortKey="Suzuki, Tohru" sort="Suzuki, Tohru" uniqKey="Suzuki T" first="Tohru" last="Suzuki">Tohru Suzuki</name><name sortKey="Yamasato, Hiroshi" sort="Yamasato, Hiroshi" uniqKey="Yamasato H" first="Hiroshi" last="Yamasato">Hiroshi Yamasato</name></noCountry><country name="Japon"><region name="Région de Kantō"><name sortKey="Murakami, Satoshi" sort="Murakami, Satoshi" uniqKey="Murakami S" first="Satoshi" last="Murakami">Satoshi Murakami</name></region><name sortKey="Takahashi, Osamu" sort="Takahashi, Osamu" uniqKey="Takahashi O" first="Osamu" last="Takahashi">Osamu Takahashi</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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